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Numerical Ocean Modeling

Getting Started

Installing Python and Jupyter
Setting up a Github Repository
Getting Familiar with Jupyter Notebooks
Installing a compiler with MPI
Getting Familiar with Unix Environments

Oceanography

Overview
Wind-Driven Circulation
Thermohaline Circulation
Primitive Equations
Momentum
Thermodynamics
Equation of State

Numerical Modeling

Model Grids
Difference Methods

MITgcm

Getting Started with MITgcm
File Layout
Choosing an optfile
Defining the Model Grid
Initial Conditions
External Forcing
Boundary Conditions
Diagnosing Issues

Computing Clusters

Navigating an HPC
Running jobs on an HPC
conda Environments

Model Analysis

Volume Budgets
Heat Budgets
Salt Budgets

A Regional Model Example

Configuration Overview
Model Grid
Bathymetry
Initial Conditions
External Forcing Conditions
Boundary Conditions
Choosing Packages
Running the Model

State Estimation

Green’s Functions

Documentation

Contributions
References

Repository
Open issue

Index

By Mike Wood

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